Fat Jar looks at your Java eclipse classpath and folds it all into one self executable jar. It always helps if programs are easy to run and I think this is where a lot of java programs fall down. If you already have just one jar, then you can make it easy for the majority of the world by creating an exe also using JSmooth.
Although I tried using both of these together and I couldn't get it working. For the moment stick to one or the other, but they're both very useful...
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